David Šmajs group: Bacterial Genetics and Genomics

DEPARTMENT OF BIOLOGY RESEARCH GROUP

Publications

2021

CHEN, W. T., David ŠMAJS, Y. F. HU, W. J. KE, Petra POSPÍŠILOVÁ, K. L. HAWLEY, M. J. CAIMANO, J. D. RADOLF, A. SENA, J. D. TUCKER, B. YANG, J. J. JULIANO, H. P. ZHENG a J. B. PARR. Analysis of Treponema pallidum Strains From China Using Improved Methods for Whole-Genome Sequencing From Primary Syphilis Chancres. The Journal of Infectious Diseases. Chicago: University of Chicago Press, 2021, roč. 223, č. 5, s. 848-853. ISSN 0022-1899. doi:10.1093/infdis/jiaa449.

GRILLOVÁ, Linda, Jana MUSILOVÁ, Klára JANEČKOVÁ, Petra POSPÍŠILOVÁ, Ivana KUKLOVÁ, Vladana WOZNICOVÁ, Hana ZAKOUCKA, David ŠMAJS. The Arg753Gln Polymorphism of Toll-Like Receptor 2 Has a Lower Occurrence in Patients with Syphilis, Suggesting Its Protective Effect in Czech and Slovak Individuals. Infect Immun. 2021. roč. 89. č. 1, s. 1-6. ISSN 0019-9567. doi: 10.1128/IAI.00503-20.

BOSÁK, Juraj, Matěj HRALA, Lenka MICENKOVÁ, David ŠMAJS. Non-antibiotic antibacterial peptides and proteins of Escherichia coli: efficacy and potency of bacteriocins. Expert Rev Anti Infect Ther. 2021. roč. 19, č.3, s. 309-322. doi: 10.1080/14787210.2020.1816824.

2020

NODA, Angel A., Islay RODRIGUEZ a David ŠMAJS. Genotyping of Treponema pallidumin Cuba (2018-2019): Increased Circulation of Recombinant Genotype and No New Treponema pallidum Subspeciesendemicum Infection Among Syphilis Patients. Sexually transmitted diseases. Philadelphia: Lippincott Williams & Wilkins, 2020, roč. 47, č. 10, s. "E39"-"E41", 3 s. ISSN 0148-5717. doi:10.1097/OLQ.0000000000001217

VRBOVÁ, Eliška, Lenka MIKALOVÁ, Linda GRILLOVÁ, Petra POSPÍŠILOVÁ, Radim STRNADEL, Eliška DASTYCHOVÁ, Martina KOJANOVA, Miluse KREIDLOVA, Daniela VANOUSOVA, Filip ROB, Premysl PROCHAZKA, Alena KRCHŇÁKOVÁ, Vladimír VAŠKŮ, Vladana WOZNICOVÁ, Monika DVOŘÁKOVÁ HEROLDOVÁ, Ivana KUKLOVA, Hana ZAKOUCKA a David ŠMAJS. A retrospective study on nested PCR detection of syphilis treponemes in clinical samples: PCR detection contributes to the diagnosis of syphilis in patients with seronegative and serodiscrepant results. Plos one. San Francisco: Public Library of Science, 2020, roč. 15, č. 8, s. 1-11. ISSN 1932-6203. doi:10.1371/journal.pone.0237949.

MICENKOVÁ, Lenka, Juraj BOSÁK, Stanislav SMATANA, Adam NOVOTNÝ, Eva BUDINSKÁ a David ŠMAJS. Administration of the Probiotic Escherichia coli Strain A0 34/86 Resulted in a Stable Colonization of the Human Intestine During the First Year of Life. Probiotics and Antimicrobial Proteins. New York: Springer New York LLC, 2020, roč. 12, č. 2, s. 343-350. ISSN 1867-1306. doi:10.1007/s12602-019-09548-3.

MIKALOVÁ, Lenka, Klára JANEČKOVÁ, Markéta NOVÁKOVÁ, Michal STROUHAL, Darina ČEJKOVÁ, K. N. HARPER a David ŠMAJS. Whole genome sequence of the Treponema pallidum subsp. endemicum strain Iraq B: A subpopulation of bejel treponemes contains full-length tprF and tprG genes similar to those present in T. p. subsp. pertenue strains. Plos One. San Francisco: Public Library Science, 2020, roč. 15, č. 4, s. 1-16. ISSN 1932-6203. doi:10.1371/journal.pone.0230926.

JANEČEK, Jan, Markéta NOVÁKOVÁ, Jan OPPELT, Petra POSPÍŠILOVÁ, Anita CUNHA, Ana Catarina SILVA, Dantong LI a David ŠMAJS. Complete Chromosomal Sequences of Two Borrelia miyamotoi Samples Obtained from Ixodes ricinus Eggs in Czechia. Microbiology Resource Announcements. Washington, D.C.: American Society for Microbiology, 2020, roč. 9, č. 14, s. 1-3. ISSN 2576-098X. doi:10.1128/MRA.01504-19.

ZONDAG, Helene C. A., Sylvia M. BRUISTEN, Eliška VRBOVÁ a David ŠMAJS. No bejel among Surinamese, Antillean and Dutch syphilis diagnosed patients in Amsterdam between 2006-2018 evidenced by multi-locus sequence typing of Treponema pallidum isolatesPLoS ONE. San Francisco: Public Library of Science, 2020, roč. 15, č. 3, s. 1-10. ISSN 1932-6203. doi:10.1371/journal.pone.0230288.

HISGEN, L., L. ABEL, L. K. HALLMAIER-WACKER, S. LUEERT, U. SIEBERT, M. FAEHNDRICH, E. STRAUSS, U. VOIGT, Markéta NOVÁKOVÁ, David ŠMAJS a S. KNAUF. High syphilis seropositivity in European brown hares (Lepus europaeus), Lower Saxony, Germany. Transboundary and Emerging Diseases. Hoboken: Wiley-Blackwell, 2020, roč. 67, č. 5, s. 2240-2244. ISSN 1865-1674. doi:10.1111/tbed.13551. 

KOHOUTOVA, Darina, Miroslava FORSTLOVA, Paula MORAVKOVA, Jiri CYRANY, Juraj BOSÁK, David ŠMAJS, Stanislav REJCHRT and Jan BURES. Bacteriocin production by mucosal bacteria in current and previous colorectal neoplasia. BMC Cancer, LONDON: BMC, 2020, vol. 20, No 1, p. 1-7. ISSN 1471-2407. doi:10.1186/s12885-020-6512-5.

SNOPKOVÁ, Kateřina, Darina ČEJKOVÁ, Kristýna DUFKOVÁ, Ivo SEDLÁČEK a David ŠMAJS. Genome sequences of two Antarctic strains of Pseudomonas prosekii: insights into adaptation to extreme conditions. Archives of Microbiology, New York: Springer, 2020, roč. 202, č. 3, s. 447-454. ISSN 0302-8933. doi:10.1007/s00203-019-01755-4.


2019

GRILLOVÁ, Linda, Keith JOLLEY, David ŠMAJS and Mathieu PICARDEAU. A public database for the new MLST scheme for Treponema pallidum subsp. pallidum: surveillance and epidemiology of the causative agent of syphilis. PeerJ, London: PEERJ INC, 2019, vol. 6, JAN 9 2019, p. 1-13. ISSN 2167-8359. doi:10.7717/peerj.6182.

MICENKOVÁ, Lenka, Juraj BOSÁK, Stanislav SMATANA, Adam NOVOTNÝ, Eva BUDINSKÁ a David ŠMAJS. Administration of the Probiotic Escherichia coli Strain A0 34/86 Resulted in a Stable Colonization of the Human Intestine During the First Year of Life. Probiotics and Antimicrobial Proteins, New York: Springer New York LLC, 2019. ISSN 1867-1306. doi:10.1007/s12602-019-09548-3.

FIEDOROVÁ, Kristýna, Matěj RADVANSKÝ, Juraj BOSÁK, Hana GROMBIŘÍKOVÁ, Eva NĚMCOVÁ, Pavlína KRÁLÍČKOVÁ, Michaela ČERNOCHOVÁ, Iva KOTÁSKOVÁ, Matej LEXA, Jiří LITZMAN, David ŠMAJS a Tomáš FREIBERGER. Bacterial and fungal gut microbiota analysis in common variable immunodeficiency (CVID) disorders: paired case-control study. In 2nd ESID Focused Meeting, Brussels. 2019.

FIEDOROVÁ, Kristýna, Matěj RADVANSKÝ, Juraj BOSÁK, Hana GROMBIŘÍKOVÁ, Eva NĚMCOVÁ, Pavlina KRÁLÍČKOVÁ, Michaela ČERNOCHOVÁ, Iva KOTÁSKOVÁ, Matej LEXA, Jiří LITZMAN, David ŠMAJS a Tomáš FREIBERGER. Bacterial but Not Fungal Gut Microbiota Alterations Are Associated With Common Variable Immunodeficiency (CVID) Phenotype. Frontiers in Immunology, LAUSANNE: FRONTIERS MEDIA SA, 2019, roč. 10, č. 1914, s. 1-14. ISSN 1664-3224. doi:10.3389/fimmu.2019.01914.

DOLEJSOVA, Tereza, Albert SOKOL, Juraj BOSÁK, David ŠMAJS, Ivo KONOPASEK, Gabriela MIKUSOVA a Radovan FISER. Colicin U from Shigella boydii Forms Voltage-Dependent Pores. Journal of Bacteriology, Washington: American Society for Microbiology, 2019, roč. 201, č. 24, s. 1-16. ISSN 0021-9193. doi:10.1128/JB.00493-19.

MICENKOVÁ, Lenka, Juraj BOSÁK, Jiří KUČERA, Matěj HRALA, Tereza DOLEJSOVA, Ondrej ŠEDO, Dirk LINKE, Radovan FISER a David ŠMAJS. Colicin Z, a structurally and functionally novel colicin type that selectively kills enteroinvasive Escherichia coli and Shigella strains. Scientific reports, LONDON: NATURE PUBLISHING GROUP, 2019, roč. 9, JUL 31 2019, s. 1-12. ISSN 2045-2322. doi:10.1038/s41598-019-47488-8.

GRILLOVÁ, Linda, Jan OPPELT, Lenka MIKALOVÁ, Markéta NOVÁKOVÁ, LLorenzo GIACANI, Anežka NIESNEROVÁ, Angel A. NODA, Ariel E. MECHALY, Petra POSPÍŠILOVÁ, Darina CEJKOVA, Philippe A. GRANGE, Nicolas DUPIN, Radim STRNADEL, Marcus CHEN, Ian DENHAM, Natasha ARORA, Mathieu PICARDEAU, Christopher WESTON, R. Allyn FORSYTH a David ŠMAJS. Directly Sequenced Genomes of Contemporary Strains of Syphilis Reveal Recombination-Driven Diversity in Genes Encoding Predicted Surface-Exposed Antigens. Frontiers in Microbiology, Lausanne: Frontiers Media SA, 2019, roč. 10, JUL 31 2019, s. 1-14. ISSN 1664-302X. doi:10.3389/fmicb.2019.01691.

BOSÁKOVÁ, Michaela, Alexandru NITĂ, Tomáš GREGOR, Miroslav VAŘECHA, Iva GUDERNOVÁ, Bohumil FAFÍLEK, Tomáš BÁRTA, Neha BASHEER, Sara POOVAKULATHU ABRAHAM, Lukáš BÁLEK, Markéta TOMANOVÁ, Jana FIALOVÁ KUČEROVÁ, Juraj BOSÁK, David POTĚŠIL, Jennifer ZIEBA, Jieun SONG, Peter KONIK, Sohyun PARK, Ivan DURAN, Zbyněk ZDRÁHAL, David ŠMAJS, Gert JANSEN, Zheng FU, Hyuk Wan KO, Aleš HAMPL, Lukáš TRANTÍREK, Deborah KRAKOW a Pavel KREJČÍ. Fibroblast growth factor receptor influences primary cilium length through an interaction with intestinal cell kinase. Proceedings of the National Academy of Sciences of the United States of America, WASHINGTON: NATL ACAD SCIENCES, 2019, roč. 116, č. 10, s. 4316-4325. ISSN 0027-8424. doi:10.1073/pnas.1800338116.

All publications back to 1995

 

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